☰ Navigation Tabs
The Conformations and Interactions of the Four-Layer Aggregate Revealed by X-ray Crystallography Diffraction Implied the Importance of Peptides at Opposite Ends in Their Assemblies
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.7 295 pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.29 62.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 173.072 α = 90 b = 221.675 β = 90 c = 225.609 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.06 50 155016
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.06
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.06 50 163217 155016 8201 99.69 0.2065 0.204 0.2016 0.2547 0.2521 RANDOM 47.8575
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.47 -3.41 -2.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.624 r_dihedral_angle_3_deg 19.653 r_dihedral_angle_4_deg 15.402 r_dihedral_angle_1_deg 6.401 r_scangle_it 2.501 r_angle_refined_deg 1.499 r_scbond_it 1.455 r_mcangle_it 1.361 r_mcbond_it 0.765 r_nbtor_refined 0.32
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.624 r_dihedral_angle_3_deg 19.653 r_dihedral_angle_4_deg 15.402 r_dihedral_angle_1_deg 6.401 r_scangle_it 2.501 r_angle_refined_deg 1.499 r_scbond_it 1.455 r_mcangle_it 1.361 r_mcbond_it 0.765 r_nbtor_refined 0.32 r_nbd_refined 0.233 r_symmetry_vdw_refined 0.217 r_symmetry_hbond_refined 0.205 r_xyhbond_nbd_refined 0.129 r_chiral_restr 0.11 r_bond_refined_d 0.013 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 36918 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection