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Mcl-1 in complex with a biphenyl cross-linked Noxa peptide.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293 15% Peg 8000, 225 mM CaCl2, 2% Ethylene Glycol,50 mM Epps (pH 8.5), VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.73 28.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.04 α = 90 b = 47.97 β = 90 c = 68.6 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 CCD MARMOSAIC 325 mm CCD 2011-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.97945 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 39.31 99.5 9850 9801
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.11 99.4 0.287 6.1 6.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 39.31 9357 9295 468 99.34 0.1972 0.19389 0.19171 0.23879 0.2558 RANDOM 27.12
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.18 -1.36 1.54
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.486 r_dihedral_angle_4_deg 19.134 r_dihedral_angle_3_deg 16.303 r_scangle_it 6.258 r_dihedral_angle_1_deg 6.001 r_scbond_it 3.791 r_mcangle_it 2.362 r_angle_refined_deg 1.789 r_mcbond_it 1.218 r_chiral_restr 0.136
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.486 r_dihedral_angle_4_deg 19.134 r_dihedral_angle_3_deg 16.303 r_scangle_it 6.258 r_dihedral_angle_1_deg 6.001 r_scbond_it 3.791 r_mcangle_it 2.362 r_angle_refined_deg 1.789 r_mcbond_it 1.218 r_chiral_restr 0.136 r_bond_refined_d 0.021 r_gen_planes_refined 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1202 Nucleic Acid Atoms Solvent Atoms 39 Heterogen Atoms 14
Software Software Software Name Purpose Blu-Ice data collection MOLREP phasing REFMAC refinement MOSFLM data reduction SCALA data scaling