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Crystal structure of FABG4 complexed with Coenzyme NADH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 0.1M MES PH 6.5, 47% (v/v) POLYPROPYLENE GLYCOL P400, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.14 42.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.333 α = 104.99 b = 71.304 β = 97.08 c = 93.293 γ = 93.66
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 93 IMAGE PLATE RIGAKU RAXIS IV++ mirrors 2010-12-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.786 89.166 96.2 0.113 11 3.9 37439 37439
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.79 2.94 89.1 0.503 0.503 0.584 0.295 1.5 3.8 5051
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.79 19.86 37439 1889 96.19 0.1656 0.1618 0.1658 0.2378 0.2387 RANDOM 40.963
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.73 -0.97 -2.66 1.21 0.33 -0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.848 r_dihedral_angle_4_deg 18.456 r_dihedral_angle_3_deg 18.446 r_dihedral_angle_1_deg 6.436 r_scangle_it 2.745 r_scbond_it 1.583 r_angle_refined_deg 1.565 r_mcangle_it 1 r_mcbond_it 0.522 r_chiral_restr 0.094
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.848 r_dihedral_angle_4_deg 18.456 r_dihedral_angle_3_deg 18.446 r_dihedral_angle_1_deg 6.436 r_scangle_it 2.745 r_scbond_it 1.583 r_angle_refined_deg 1.565 r_mcangle_it 1 r_mcbond_it 0.522 r_chiral_restr 0.094 r_bond_refined_d 0.014 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12057 Nucleic Acid Atoms Solvent Atoms 216 Heterogen Atoms 189
Software Software Software Name Purpose SCALA data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction StructureStudio data collection XSCALE data scaling