X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.529324% PEG 4000, 0.16M magnesium chloride, 0.08M Tris-HCl pH8.5, 20% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
3.362.73

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 103.54α = 90
b = 210.16β = 90
c = 93.93γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2012-04-26MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSOLEIL BEAMLINE PROXIMA 10.98011SOLEILPROXIMA 1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.2491000.09912.58.7522295220622
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.31000.5522.889.26430

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUT2.246.9725222949655267099.960.2270.229710.26376RANDOM61.931
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.22-0.55-0.68
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.55
r_dihedral_angle_3_deg20.432
r_dihedral_angle_4_deg18.082
r_dihedral_angle_1_deg6.294
r_scangle_it4.942
r_scbond_it2.96
r_angle_refined_deg2.034
r_mcangle_it1.925
r_mcbond_it1.049
r_chiral_restr0.138
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.55
r_dihedral_angle_3_deg20.432
r_dihedral_angle_4_deg18.082
r_dihedral_angle_1_deg6.294
r_scangle_it4.942
r_scbond_it2.96
r_angle_refined_deg2.034
r_mcangle_it1.925
r_mcbond_it1.049
r_chiral_restr0.138
r_bond_refined_d0.024
r_gen_planes_refined0.011
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4549
Nucleic Acid Atoms
Solvent Atoms158
Heterogen Atoms22

Software

Software
Software NamePurpose
XDSdata scaling
autoSHARPphasing
REFMACrefinement
XDSdata reduction