☰ Navigation Tabs
The structure of cowpox virus CPXV018 (OMCP)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293 0.9 M ammonium phosphate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.2 61.57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 105.173 α = 90 b = 105.173 β = 90 c = 108.657 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD NOIR-1 2008-04-12 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD NOIR-1 2008-04-12 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 4.2.2 0.9790 ALS 4.2.2 2 SYNCHROTRON ALS BEAMLINE 4.2.2 0.9792,0.9641 ALS 4.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.25 50 97.8 0.05 30.86 7.7 32729
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.25 2.33 88.8 0.486 2.73 5.3 2933
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MAD 2.25 47.334 1.33 32644 2005 97.6 0.2161 0.2137 0.2143 0.2514 0.2512 50.1886
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.6027 4.6027 -9.2054
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 9.262 f_angle_d 0.662 f_chiral_restr 0.049 f_bond_d 0.002 f_plane_restr 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3795 Nucleic Acid Atoms Solvent Atoms 164 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing PHENIX refinement PDB_EXTRACT data extraction Blu-Ice data collection SHARP phasing