4EWH

Co-crystal structure of ACK1 with inhibitor


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION298vapor diffusion, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.448.72

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 201.202α = 90
b = 42.48β = 95.29
c = 71.031γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDADSC QUANTUM 315MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.2ALS5.0.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.5100.17399.80.0580.05816.43.621086
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.6499.90.4370.4371.73.63048

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.510021084108299.710.25880.25570.3132RANDOM51.1283
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.761.293.52-1.52
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg9.261
r_scangle_it4.169
r_scbond_it2.504
r_angle_refined_deg2.137
r_mcangle_it1.876
r_mcbond_it1.013
r_symmetry_vdw_refined0.367
r_symmetry_hbond_refined0.342
r_nbd_refined0.248
r_xyhbond_nbd_refined0.187
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg9.261
r_scangle_it4.169
r_scbond_it2.504
r_angle_refined_deg2.137
r_mcangle_it1.876
r_mcbond_it1.013
r_symmetry_vdw_refined0.367
r_symmetry_hbond_refined0.342
r_nbd_refined0.248
r_xyhbond_nbd_refined0.187
r_chiral_restr0.125
r_bond_refined_d0.021
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4411
Nucleic Acid Atoms
Solvent Atoms23
Heterogen Atoms68

Software

Software
Software NamePurpose
SCALAdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction