Experiment: 4EUK

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	6.5	293	20% PEG 550 MME, 10% PEG 20000, 0.1M MES/imidazole, 0.02M 1,6-hexanediol, 0.02M 1-butanol, 0.02M (R,S)-1,2-propandiol, 0.02M 2-propanol, 0.02M 1,3-propandiol, 0.02M 1,4-butandiol , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K

Crystal Properties
Matthews coefficient	Solvent content
2.9	57.63

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 106.8	α = 90
b = 106.8	β = 90
c = 106.8	γ = 90

Symmetry
Space Group	P 21 3

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MARMOSAIC 225 mm CCD		2011-02-19	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SLS BEAMLINE X06DA	1.0000	SLS	X06DA

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.95	47.76	99.9	0.051	23.3	13.4	29841	29820	-3	-3	40.6

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.95	2	99.4		0.413	3.9	11.2	2189

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SIRAS	THROUGHOUT	1.95	47.76	29817	28327	1490	100	0.17342	0.17342	0.17219	0.18	0.19683	0.2	RANDOM	31.135

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	38.467
r_dihedral_angle_4_deg	15.046
r_dihedral_angle_3_deg	14.43
r_scangle_it	7.487
r_scbond_it	5.059
r_dihedral_angle_1_deg	4.934
r_mcangle_it	3.368
r_mcbond_it	2.212
r_angle_refined_deg	1.248
r_mcbond_other	1.099

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	38.467
r_dihedral_angle_4_deg	15.046
r_dihedral_angle_3_deg	14.43
r_scangle_it	7.487
r_scbond_it	5.059
r_dihedral_angle_1_deg	4.934
r_mcangle_it	3.368
r_mcbond_it	2.212
r_angle_refined_deg	1.248
r_mcbond_other	1.099
r_angle_other_deg	0.879
r_chiral_restr	0.074
r_bond_refined_d	0.013
r_gen_planes_refined	0.005
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	2221
Nucleic Acid Atoms
Solvent Atoms	182
Heterogen Atoms	5

Software

Software
Software Name	Purpose
RemDAq	data collection
autoSHARP	phasing
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.