4EED

CorA coiled-coil mutant under Mg2+ presence


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7298PEG 400, MgCl2, pH 7.0, temperature 298K, VAPOR DIFFUSION, HANGING DROP
Crystal Properties
Matthews coefficientSolvent content
3.7166.84

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 121.7α = 90
b = 132.5β = 90
c = 179.1γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC CCD3002010-01-27MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCLSI BEAMLINE 08ID-10.97949CLSI08ID-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.9248.881.87.42181821818
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
13.924.0224.92.27.5466

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2IUB3.9248.792181821818109682.070.29960.29960.29710.3512RANDOM145.2355
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.01-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.315
r_dihedral_angle_3_deg18.431
r_dihedral_angle_4_deg12.729
r_dihedral_angle_1_deg6.364
r_scangle_it4.027
r_mcangle_it2.216
r_scbond_it2.034
r_angle_refined_deg1.235
r_mcbond_it1.172
r_angle_other_deg0.834
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.315
r_dihedral_angle_3_deg18.431
r_dihedral_angle_4_deg12.729
r_dihedral_angle_1_deg6.364
r_scangle_it4.027
r_mcangle_it2.216
r_scbond_it2.034
r_angle_refined_deg1.235
r_mcbond_it1.172
r_angle_other_deg0.834
r_mcbond_other0.102
r_chiral_restr0.061
r_bond_refined_d0.011
r_gen_planes_refined0.005
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms12965
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms14

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
MxDCdata collection
XDSdata reduction
XSCALEdata scaling