X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.526% (W/V) PEG 3350, 0.2 M AMMONIUM SULPHATE, 0.1 M BIS-TRIS, PH 6.5.
Crystal Properties
Matthews coefficientSolvent content
2.0741

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 39.76α = 90
b = 92.45β = 90.18
c = 81.17γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2012-10-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-4ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.510096.70.0813.63.8906492.38
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.55890.642.43.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2G991.540.5886154449496.530.170570.169890.18344RANDOM11.934
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.170.744.49-3.32
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.663
r_dihedral_angle_3_deg11.56
r_dihedral_angle_4_deg10.987
r_dihedral_angle_1_deg6.815
r_sphericity_bonded2.657
r_rigid_bond_restr2.55
r_angle_refined_deg1.007
r_angle_other_deg0.665
r_scbond_it0.54
r_mcbond_it0.443
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.663
r_dihedral_angle_3_deg11.56
r_dihedral_angle_4_deg10.987
r_dihedral_angle_1_deg6.815
r_sphericity_bonded2.657
r_rigid_bond_restr2.55
r_angle_refined_deg1.007
r_angle_other_deg0.665
r_scbond_it0.54
r_mcbond_it0.443
r_mcbond_other0.443
r_chiral_restr0.06
r_bond_refined_d0.004
r_gen_planes_refined0.003
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_it
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_sphericity_free
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4891
Nucleic Acid Atoms
Solvent Atoms321
Heterogen Atoms18

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing