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Cryo-EM of a pre-recycling complex with eRF1 and ABCE1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1DT9
Sample CMV-STALLED WHEAT GERM 80S-RNC BOUND TO ERF1 AND ABCE1-ADPNP
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details VITRIFICATION 1 -CRYOGEN- ETHANE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT MARK IV, METHOD- BLOT FOR 3 SECONDS BEFORE PLUNGING
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 39309 Reported Resolution (Å) 8.75 Resolution Method Other Details SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2598. Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (1DT9) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details METHOD--RIGID BODY
Data Acquisition Detector Type TVIPS TEMCAM-F416 (4k x 4k) Electron Dose (electrons/Å**2) 20
Imaging Experiment 1 Date of Experiment 2013-02-20 Temperature (Kelvin) Microscope Model FEI MORGAGNI Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification 147136 Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL FITTING Coot MODEL FITTING MDFF MODEL FITTING UCSF Chimera PARTICLE SELECTION STARFISH RECONSTRUCTION SPIDER
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details ON VOLUMES (SPIDER)