X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelOtherDIFFERENT CRYSTAL FORM OF DRUVRD

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
116-22% PEG 3350, 0.1 M BIS-TRIS PROPANE PH 6.5-7.5, 0.1-0.3 M NA-NITRATE
Crystal Properties
Matthews coefficientSolvent content
2.6157.91

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 71.457α = 90
b = 390.044β = 106.13
c = 71.559γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315rMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID23-1ESRFID23-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1446.199.60.1110.14.430051149.79
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
144.2299.50.662.34.2

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTDIFFERENT CRYSTAL FORM OF DRUVRD3.99746.14730051151694.510.24770.24640.2713207.7
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
12.022223.0968-32.440520.4183
RMS Deviations
KeyRefinement Restraint Deviation
f_dihedral_angle_d18.905
f_angle_d1.075
f_chiral_restr0.079
f_bond_d0.006
f_plane_restr0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms20337
Nucleic Acid Atoms2080
Solvent Atoms
Heterogen Atoms128

Software

Software
Software NamePurpose
PHENIXrefinement
SCALAdata scaling
PHASERphasing