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Model of human kinesin-5 motor domain (3HQD) and mammalian tubulin heterodimer (1JFF) docked into the 9.7-angstrom cryo-EM map of microtubule-bound kinesin-5 motor domain in the AMPPPNP state.
13-PROTOFILAMENT MICROTUBULE-BOUND HUMAN KINESIN-5 MOTOR DOMAIN WITH AMPPNP
Specimen Preparation
Sample Aggregation State
FILAMENT
Vitrification Instrument
FEI VITROBOT MARK I
Cryogen Name
ETHANE
Sample Vitrification Details
CRYOGEN- ETHANE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT MARK I, METHOD- CHAMBER AT 24 DEGREES C, BLOT 2.5 SEC,
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
3587
Reported Resolution (Å)
9.7
Resolution Method
Other Details
THE N-TERMINAL RESIDUES 6 TO 16 WERE BUILT MANUALLY IN THE EM DENSITY. SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2077. (DEPOSITION ID: 10751 ...
THE N-TERMINAL RESIDUES 6 TO 16 WERE BUILT MANUALLY IN THE EM DENSITY. SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2077. (DEPOSITION ID: 10751).
Refinement Type
Symmetry Type
HELICAL
Map-Model Fitting and Refinement
Id
1 (3HQD, 1JFF)
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Cross-correlation coefficient
Overall B Value
Fitting Procedure
Details
METHOD--RIGID BODY (1JFF). RIGID BODY AND FLEXIBLE FITTING (3HQD) REFINEMENT
PROTOCOL--X-RAY