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Structure of human I113T SOD1 mutant complexed with 5-Fluorouridine in the p21 space group
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 100 MM SODIUM ACETATE, 150 MM SODIUM CHLORIDE, 2.5 AMMONIUM SULPHATE PH 5
Crystal Properties Matthews coefficient Solvent content 1.79 31.32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.03 α = 90 b = 68.14 β = 104.19 c = 49.05 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2010-02-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 SOLEIL PROXIMA 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.06 39 87.8 0.01 7.5 2.4 104581 11.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.06 1.12 68.2 0.42 1.5 1.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.06 39 99352 5229 100 0.16394 0.16202 0.1678 0.20002 0.2037 RANDOM 9.47
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.82 -0.01 -0.25 -0.58
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.411 r_dihedral_angle_4_deg 11.603 r_dihedral_angle_3_deg 11.499 r_dihedral_angle_1_deg 6.871 r_scangle_it 4.595 r_scbond_it 3.358 r_mcangle_it 2.52 r_mcbond_it 1.772 r_angle_refined_deg 1.717 r_rigid_bond_restr 1.494
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.411 r_dihedral_angle_4_deg 11.603 r_dihedral_angle_3_deg 11.499 r_dihedral_angle_1_deg 6.871 r_scangle_it 4.595 r_scbond_it 3.358 r_mcangle_it 2.52 r_mcbond_it 1.772 r_angle_refined_deg 1.717 r_rigid_bond_restr 1.494 r_angle_other_deg 1.217 r_mcbond_other 0.649 r_chiral_restr 0.14 r_bond_refined_d 0.015 r_gen_planes_refined 0.01 r_gen_planes_other 0.003 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2218 Nucleic Acid Atoms Solvent Atoms 463 Heterogen Atoms 73
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling REFMAC phasing