☰ Navigation Tabs
The crystal structure of the human Bub1 TPR domain in complex with the KI motif of Knl1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3ESL PDB ENTRY 3ESL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 1.25-1.3 M NA MALONATE, PH 6.0.
Crystal Properties Matthews coefficient Solvent content 3.03 59.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.279 α = 90 b = 130.969 β = 110.17 c = 74.956 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2009-07-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 65 98.8 0.07 13.7 2.8 32541 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.74 99.6 0.5 3.2 2.8
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 3ESL 2.6 61.983 1.38 32540 1653 98.53 0.1889 0.1859 0.2436 0.2436
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.1026 0.3248 0.8728 -1.9754
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 21.949 f_angle_d 1.173 f_chiral_restr 0.089 f_bond_d 0.009 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5377 Nucleic Acid Atoms Solvent Atoms 120 Heterogen Atoms
Software Software Software Name Purpose PHENIX refinement MOSFLM data reduction SCALA data scaling PHASER phasing