Aphotorhaptin A, N-acetylated monocyclic daropeptide from Photorhabdus asymbiotica
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H NOESY | 2 mM NA- daropeptide aphotorhaptin | DMSO | 0 | 7 | 1 atm | 298 | Bruker AVANCE 900 |
| 2 | 2D 1H-1H TOCSY | 2 mM NA- daropeptide aphotorhaptin | DMSO | 0 | 7 | 1 atm | 298 | Bruker AVANCE 900 |
| 3 | 2D 1H-13C HSQC-TOCSY | 2 mM NA- daropeptide aphotorhaptin | DMSO | 0 | 7 | 1 atm | 298 | Bruker AVANCE 900 |
| 4 | 2D 1H-13C HSQC | 2 mM NA- daropeptide aphotorhaptin | DMSO | 0 | 7 | 1 atm | 298 | Bruker AVANCE 900 |
| 5 | 2D 1H-13C HMBC | 2 mM NA- daropeptide aphotorhaptin | DMSO | 0 | 7 | 1 atm | 298 | Bruker AVANCE 900 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 900 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | X-PLOR NIH | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | X-PLOR NIH | 3.8 | Schwieters, Kuszewski, Tjandra and Clore |
| 2 | structure calculation | X-PLOR NIH | 3.8 | Schwieters, Kuszewski, Tjandra and Clore |
| 3 | chemical shift assignment | MestreLab (Mnova / MestReNova / MestReC) | 14.0.0 | Mestrelab Research S.L. |
| 4 | peak picking | NMRFAM-SPARKY | 1.2 | Lee, Tonelli and Markley |
