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Crystal structure of hypothetical protein TTHB210 from Thermus thermophilus HB8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.8 293 0.9M K/Na tartrate, 0.1M Tris-HCl, 40mM magnesium chloride, pH 8.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K 2 VAPOR DIFFUSION, HANGING DROP 8.8 293 0.95M K/Na tartrate, 0.1M Tris-HCl, 45mM magnesium chloride, pH 8.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 154.977 α = 90 b = 100.16 β = 131.19 c = 106.366 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-225 vertically bent two dimensional focusing mirror coated in Rhodium 2007-09-29 M MAD 2 2 x-ray 100 CCD RAYONIX MX-225 vertically bent two dimensional focusing mirror coated in Rhodium 2007-10-06 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL26B2 0.9789, 0.9, 0.9795 SPring-8 BL26B2 2 SYNCHROTRON SPRING-8 BEAMLINE BL26B2 0.9789, 0.9, 0.9795 SPring-8 BL26B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.2 50 99.4 0.061 40.2 5.2 61889 22.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.2 46.11 61889 6258 99.5 0.207 0.201 0.201 0.2069 0.252 0.2013 RANDOM 40.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.25 5.96 -4.27 0.01
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 25 c_scangle_it 6.79 c_scbond_it 5.67 c_mcangle_it 4.66 c_mcbond_it 3.5 c_angle_deg 1.6 c_improper_angle_d 1.01 c_bond_d 0.009 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 25 c_scangle_it 6.79 c_scbond_it 5.67 c_mcangle_it 4.66 c_mcbond_it 3.5 c_angle_deg 1.6 c_improper_angle_d 1.01 c_bond_d 0.009 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8469 Nucleic Acid Atoms Solvent Atoms 424 Heterogen Atoms
Software Software Software Name Purpose BSS data collection SOLVE phasing CNS refinement HKL-2000 data reduction HKL-2000 data scaling