X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.5288100mM MgCl2, 100mM NaCacodylate pH 6.5, 18% PEG 3350 (w/v), VAPOR DIFFUSION, SITTING DROP, temperature 288K
Crystal Properties
Matthews coefficientSolvent content
3.564.86

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 31.562α = 90
b = 353.588β = 90.02
c = 86.045γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2009-12-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBSRF BEAMLINE 3W1A1.0000BSRF3W1A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.6305.08614400422
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 3HAJ2.629.6344004235880.710.22020.2060.201430.2918RANDOM52.611
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.02-0.060.06-0.04
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.75
r_dihedral_angle_3_deg23.191
r_dihedral_angle_4_deg20.34
r_dihedral_angle_1_deg6.423
r_scangle_it3.988
r_scbond_it2.44
r_angle_refined_deg1.601
r_mcangle_it1.434
r_rigid_bond_restr1.26
r_mcbond_it0.759
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.75
r_dihedral_angle_3_deg23.191
r_dihedral_angle_4_deg20.34
r_dihedral_angle_1_deg6.423
r_scangle_it3.988
r_scbond_it2.44
r_angle_refined_deg1.601
r_mcangle_it1.434
r_rigid_bond_restr1.26
r_mcbond_it0.759
r_chiral_restr0.118
r_bond_refined_d0.014
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9523
Nucleic Acid Atoms
Solvent Atoms202
Heterogen Atoms4

Software

Software
Software NamePurpose
HKL-2000data collection
AMoREphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling