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GGVLVN segment from Human Prostatic Acid Phosphatase Residues 260-265, involved in Semen-Derived Enhancer of Viral Infection
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 298 0.1M MES pH6.0, 0.2M Zn(OAc)2, 10%(w/v)PEG-8000, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.55 20.39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 4.834 α = 90 b = 17.682 β = 90 c = 40.322 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2009-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-E 0.9791 APS 24-ID-E
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 80 86.4 0.149 8.9 4.9 621 621 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.55 74 0.256 2.6 54
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.5 20.16 609 609 61 87.5 0.1818 0.1818 0.1779 0.2022 0.2189 0.266 RANDOM 9.4571
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.21 -0.4 0.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 57.108 r_dihedral_angle_3_deg 13.476 r_dihedral_angle_1_deg 7.617 r_scangle_it 2.739 r_scbond_it 1.593 r_angle_refined_deg 1.291 r_mcangle_it 1.266 r_angle_other_deg 0.755 r_mcbond_it 0.725 r_mcbond_other 0.168
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 57.108 r_dihedral_angle_3_deg 13.476 r_dihedral_angle_1_deg 7.617 r_scangle_it 2.739 r_scbond_it 1.593 r_angle_refined_deg 1.291 r_mcangle_it 1.266 r_angle_other_deg 0.755 r_mcbond_it 0.725 r_mcbond_other 0.168 r_chiral_restr 0.06 r_bond_refined_d 0.003 r_gen_planes_refined 0.002 r_bond_other_d 0.001 r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 39 Nucleic Acid Atoms Solvent Atoms 1 Heterogen Atoms 5
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction ADSC data collection