X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION6.20.2 M Ammonium iodide and 20% (w/v) Polyethylene glycol 3,350, pH 6.2, VAPOR DIFFUSION, temperature 100K
Crystal Properties
Matthews coefficientSolvent content
2.1843.45

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.128α = 90
b = 103.281β = 106.53
c = 45.632γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDBruker Platinum 135Helios mirrors2009-01-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODEBRUKER AXS MICROSTAR1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.692598.85.674132541325
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.691.7897.60.40562.532.84

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.69253472234722184387.530.184420.181880.22861RANDOM16.602
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.4-0.15-0.430.74
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.142
r_dihedral_angle_4_deg16.906
r_dihedral_angle_3_deg15.14
r_dihedral_angle_1_deg7.002
r_scangle_it4.031
r_scbond_it2.746
r_angle_refined_deg1.902
r_mcangle_it1.731
r_mcbond_it1.103
r_angle_other_deg1.001
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg29.142
r_dihedral_angle_4_deg16.906
r_dihedral_angle_3_deg15.14
r_dihedral_angle_1_deg7.002
r_scangle_it4.031
r_scbond_it2.746
r_angle_refined_deg1.902
r_mcangle_it1.731
r_mcbond_it1.103
r_angle_other_deg1.001
r_mcbond_other0.392
r_chiral_restr0.118
r_bond_refined_d0.022
r_gen_planes_refined0.009
r_gen_planes_other0.003
r_bond_other_d0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2718
Nucleic Acid Atoms
Solvent Atoms592
Heterogen Atoms11

Software

Software
Software NamePurpose
PROTEUM PLUSdata collection
SHELXmodel building
REFMACrefinement
SAINTdata reduction
PROTEUM PLUSdata scaling
SHELXphasing