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Crystal structure of mEosFP in its green state
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1ZUX PDB ENTRY 1ZUX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 298 2.2 M ammonium sulfate, 0.1 M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 2.75 55.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.45 α = 90 b = 96.82 β = 90 c = 140.43 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2007-07-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-3 0.931 ESRF ID14-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.25 56.796 92.8 80225 74471 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.25 2.5 99.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1ZUX 2.25 48.41 56351 53525 2817 100 0.23434 0.23175 0.2328 0.28352 0.2835 RANDOM 33.273
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.05 0.01 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.059 r_dihedral_angle_4_deg 17.825 r_dihedral_angle_3_deg 17.088 r_dihedral_angle_1_deg 7.068 r_angle_refined_deg 1.42 r_scangle_it 1.29 r_angle_other_deg 0.87 r_mcangle_it 0.794 r_scbond_it 0.768 r_mcbond_it 0.425
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.059 r_dihedral_angle_4_deg 17.825 r_dihedral_angle_3_deg 17.088 r_dihedral_angle_1_deg 7.068 r_angle_refined_deg 1.42 r_scangle_it 1.29 r_angle_other_deg 0.87 r_mcangle_it 0.794 r_scbond_it 0.768 r_mcbond_it 0.425 r_chiral_restr 0.078 r_mcbond_other 0.042 r_bond_other_d 0.007 r_bond_refined_d 0.005 r_gen_planes_refined 0.005 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7180 Nucleic Acid Atoms Solvent Atoms 382 Heterogen Atoms 91
Software Software Software Name Purpose ADSC data collection PHASER phasing REFMAC refinement XDS data reduction SCALA data scaling