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Crystal Structure of the Cytochrome P450 Monooxygenase AurH (ntermII) from Streptomyces Thioluteus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.7 293 0.1M NaCl, 2.2M AS, 0.1 M Tris pH=8.6-8.8, 14 mg/mL, pH 8.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.48 50.39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 129.06 α = 90 b = 129.06 β = 90 c = 71.41 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2008-06-08 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2007-11-19 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 0.91841 BESSY 14.1 2 SYNCHROTRON BESSY BEAMLINE 14.1 1.73844, 1.74044, 1.63138, 1.85053 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.54 20 98.9 27.5 7.1 65526 64806 3 3 28.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.54 1.58 99.3 2.9 2.9 4832
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.54 19.32 61563 3240 100 0.15801 0.15646 0.1913 0.18769 0.2187 RANDOM 14.586
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.74 -0.37 -0.74 1.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.509 r_dihedral_angle_4_deg 16.474 r_dihedral_angle_3_deg 13.29 r_dihedral_angle_1_deg 5.883 r_scangle_it 4.464 r_scbond_it 3.362 r_mcangle_it 2.989 r_mcbond_it 2.129 r_angle_refined_deg 1.575 r_angle_other_deg 0.978
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.509 r_dihedral_angle_4_deg 16.474 r_dihedral_angle_3_deg 13.29 r_dihedral_angle_1_deg 5.883 r_scangle_it 4.464 r_scbond_it 3.362 r_mcangle_it 2.989 r_mcbond_it 2.129 r_angle_refined_deg 1.575 r_angle_other_deg 0.978 r_mcbond_other 0.969 r_chiral_restr 0.095 r_bond_refined_d 0.015 r_gen_planes_refined 0.008 r_gen_planes_other 0.002 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3249 Nucleic Acid Atoms Solvent Atoms 425 Heterogen Atoms 63
Software Software Software Name Purpose MAR345dtb data collection SHARP phasing REFMAC refinement XDS data reduction XSCALE data scaling