X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.4300Excess of NaNO3 and 10% of Ditionite, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 300K
Crystal Properties
Matthews coefficientSolvent content
2.1743.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 90.092α = 90
b = 52.029β = 123.07
c = 77.749γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SEALED TUBEOXFORD DIFFRACTION ENHANCE ULTRA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.965.0921667

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB entry 1HRC1.965.0921667116695.250.197120.192850.27616RANDOM14.267
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.261.36-1.312.53
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.061
r_dihedral_angle_4_deg26.403
r_dihedral_angle_3_deg16.915
r_dihedral_angle_1_deg6.279
r_scangle_it3.302
r_scbond_it2.379
r_angle_refined_deg1.794
r_mcangle_it1.471
r_mcbond_it1.085
r_nbtor_refined0.305
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.061
r_dihedral_angle_4_deg26.403
r_dihedral_angle_3_deg16.915
r_dihedral_angle_1_deg6.279
r_scangle_it3.302
r_scbond_it2.379
r_angle_refined_deg1.794
r_mcangle_it1.471
r_mcbond_it1.085
r_nbtor_refined0.305
r_symmetry_hbond_refined0.268
r_symmetry_vdw_refined0.247
r_xyhbond_nbd_refined0.215
r_nbd_refined0.207
r_chiral_restr0.099
r_bond_refined_d0.02
r_gen_planes_refined0.011
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2478
Nucleic Acid Atoms
Solvent Atoms365
Heterogen Atoms201

Software

Software
Software NamePurpose
AMoREphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling