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Structure of Intrinsic Factor-Cobalamin bound to its receptor Cubilin
Crystallization Crystal Properties Matthews coefficient Solvent content 4.35 71.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 117.684 α = 90 b = 204.179 β = 90 c = 410.023 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 2009-02-20 M SINGLE WAVELENGTH 2 1 x-ray
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.9 SLS X06SA 2 SYNCHROTRON MAX II BEAMLINE I911-3 1.8 MAX II I911-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 3.3 50 96.9 0.13 11.5 4.2 74572 72280 2 2
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 3.3 47.848 2.01 72265 1102 96.95 0.2114 0.2109 0.2071 0.2425 0.2445
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 26.398 f_angle_d 1.93 f_chiral_restr 0.138 f_bond_d 0.013 f_plane_restr 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 19764 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 1029
Software Software Software Name Purpose PHENIX refinement