☰ Navigation Tabs
Structure of the measles virus hemagglutinin bound to the CD46 receptor
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2ZB6 PDB entries 2ZB6, 1CKL, and 2O39 experimental model PDB 1CKL PDB entries 2ZB6, 1CKL, and 2O39 experimental model PDB 2O39 PDB entries 2ZB6, 1CKL, and 2O39
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 293 12% PEG-8000, 0.2 M Ammonium Sulphate 2% PEG-400, 1% 1,2,3 heptanetriol, 1 mM Sodium Tungstate, 0.1 M Mes, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.4 63.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.365 α = 90 b = 105.833 β = 90 c = 208.71 γ = 90
Symmetry Space Group P 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2003-01-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.1 20 96 0.048 22.7 3.7 33285 101.02
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.1 3.2 96 0.38 2.1 3.2
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB entries 2ZB6, 1CKL, and 2O39 3.1 14.976 1.38 31869 1588 96.04 0.2283 0.2266 0.2291 0.2592 0.2326
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 56.3438 -40.0922 -16.2516
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 26.624 f_angle_d 1.497 f_chiral_restr 0.112 f_bond_d 0.008 f_plane_restr 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8235 Nucleic Acid Atoms Solvent Atoms 8 Heterogen Atoms 99
Software Software Software Name Purpose MAR345dtb data collection PHASER phasing PHENIX refinement DENZO data reduction SCALEPACK data scaling