3HT2

Zink containing polyketide cyclase RemF from Streptomyces resistomycificus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.52931M tri-sodium citrate, 0.1M sodium cacodylate, 0.2M ZnCl2, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.4148.97

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 34.433α = 90
b = 97.255β = 91.99
c = 47.743γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 210r2007-12-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM161.282ESRFBM16

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1248.62970.07123.46.92059420594
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.11820.1448.64.92495

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUTNative RemF248.621950819508106296.890.195770.195770.193140.2444RANDOM19.966
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.620.08-1.612.23
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.02
r_dihedral_angle_4_deg13.223
r_dihedral_angle_3_deg11.895
r_dihedral_angle_1_deg6.196
r_scangle_it2.425
r_scbond_it1.437
r_angle_refined_deg1.339
r_mcangle_it1.011
r_angle_other_deg0.83
r_mcbond_it0.574
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.02
r_dihedral_angle_4_deg13.223
r_dihedral_angle_3_deg11.895
r_dihedral_angle_1_deg6.196
r_scangle_it2.425
r_scbond_it1.437
r_angle_refined_deg1.339
r_mcangle_it1.011
r_angle_other_deg0.83
r_mcbond_it0.574
r_mcbond_other0.14
r_chiral_restr0.076
r_bond_refined_d0.011
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2272
Nucleic Acid Atoms
Solvent Atoms257
Heterogen Atoms2

Software

Software
Software NamePurpose
ProDCdata collection
SOLVEphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling