3H3M

Crystal structure of flagellar protein FliT from Bordetella bronchiseptica


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP2930.2M POTASSIUM THIOCYANATE,30% PEG 2K MME, VAPOR DIFFUSION, HANGING DROP, temperature 293K

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 67.751α = 90
b = 67.751β = 90
c = 82.289γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315rMIRROR2009-04-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.9793APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.541.497.30.1090.10918.9399.46894-346.2
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.5498.20.5120.5122.99.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.541.4687532697.530.2250.2220.271RANDOM10.87
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.29-0.290.57
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.443
r_dihedral_angle_4_deg28.352
r_dihedral_angle_3_deg21.307
r_dihedral_angle_1_deg6.068
r_scangle_it4.138
r_scbond_it2.726
r_mcangle_it1.675
r_angle_refined_deg1.651
r_angle_other_deg1.029
r_mcbond_it0.871
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.443
r_dihedral_angle_4_deg28.352
r_dihedral_angle_3_deg21.307
r_dihedral_angle_1_deg6.068
r_scangle_it4.138
r_scbond_it2.726
r_mcangle_it1.675
r_angle_refined_deg1.651
r_angle_other_deg1.029
r_mcbond_it0.871
r_mcbond_other0.145
r_chiral_restr0.084
r_bond_refined_d0.019
r_gen_planes_refined0.007
r_bond_other_d0.004
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1295
Nucleic Acid Atoms
Solvent Atoms10
Heterogen Atoms1

Software

Software
Software NamePurpose
HKL-3000data collection
HKL-3000phasing
MLPHAREphasing
DMmodel building
SHELXDphasing
RESOLVEmodel building
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling
DMphasing
RESOLVEphasing