3H1B

Crystal structure of EstE5, was soaked by isopropyl alcohol


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52950.1M Tris-HCl pH 7.5, 2.2M ammonium sulfate, 0.2M lithium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
2.0439.58

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 61.307α = 90
b = 61.307β = 90
c = 150.144γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 2102009-02-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPAL/PLS BEAMLINE 6C11.23PAL/PLS6C1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.15091.21603422
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.12.1875.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 3FAK2.147.49160341505582190.770.242430.239480.239480.29528RANDOM17.523
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.290.29-0.57
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.67
r_dihedral_angle_4_deg25.008
r_dihedral_angle_3_deg22.867
r_dihedral_angle_1_deg9.994
r_scangle_it5.877
r_scbond_it4.371
r_angle_refined_deg3.363
r_mcangle_it2.541
r_mcbond_it1.845
r_symmetry_hbond_refined0.351
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.67
r_dihedral_angle_4_deg25.008
r_dihedral_angle_3_deg22.867
r_dihedral_angle_1_deg9.994
r_scangle_it5.877
r_scbond_it4.371
r_angle_refined_deg3.363
r_mcangle_it2.541
r_mcbond_it1.845
r_symmetry_hbond_refined0.351
r_nbtor_refined0.327
r_symmetry_vdw_refined0.302
r_nbd_refined0.251
r_chiral_restr0.214
r_xyhbond_nbd_refined0.16
r_bond_refined_d0.041
r_gen_planes_refined0.016
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2241
Nucleic Acid Atoms
Solvent Atoms20
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-2000data collection
MOLREPphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling