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CRYSTAL STRUCTURE OF PUTATIVE ARGINYL T-RNA SYNTHETASE FROM Campylobacter jejuni;
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.5 294 100 MM BIS-TRIS, 200 MM AMMONIUM SULFATE, 25% (V/V) PEG3350, 10% GLYCEROL, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K
Crystal Properties Matthews coefficient Solvent content 3.27 62.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 106.595 α = 90 b = 106.595 β = 90 c = 210.017 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-12-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-C APS 24-ID-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 50 100 0.081 5.7 9.3 36585 -5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.3 100 0.89 1.9 9.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.2 20 35348 1137 99.93 0.2151 0.21375 0.2092 0.25785 0.251 RANDOM 54.202
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.36 0.68 1.36 -2.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.054 r_dihedral_angle_3_deg 18.199 r_dihedral_angle_4_deg 14.436 r_scangle_it 8.342 r_scbond_it 5.763 r_dihedral_angle_1_deg 4.863 r_mcangle_it 4.753 r_mcbond_it 3.167 r_angle_refined_deg 1.116 r_nbtor_refined 0.298
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.054 r_dihedral_angle_3_deg 18.199 r_dihedral_angle_4_deg 14.436 r_scangle_it 8.342 r_scbond_it 5.763 r_dihedral_angle_1_deg 4.863 r_mcangle_it 4.753 r_mcbond_it 3.167 r_angle_refined_deg 1.116 r_nbtor_refined 0.298 r_symmetry_hbond_refined 0.201 r_xyhbond_nbd_refined 0.152 r_nbd_refined 0.15 r_symmetry_vdw_refined 0.126 r_chiral_restr 0.08 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3593 Nucleic Acid Atoms Solvent Atoms 152 Heterogen Atoms 26
Software Software Software Name Purpose SHELX model building REFMAC refinement SHELX phasing