CRYSTAL STRUCTURE OF PUTATIVE ARGINYL T-RNA SYNTHETASE FROM Campylobacter jejuni;
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | DALR_1,tRNA-synt_1_1st | e3fnrA2 | A: alpha bundles | X: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology) | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology) | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: DALR_1,tRNA-synt_1_1st | ECOD (1.6) |
| A | tRNA-synt_1d | e3fnrA1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: tRNA-synt_1d | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.730.10 | Mainly Alpha | Orthogonal Bundle | Isoleucyl-tRNA Synthetase | Domain 1 | CATH (4.3.0) |
| A | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00750 | tRNA synthetases class I (R), catalytic domain (tRNA-synt_1d) | tRNA synthetases class I (R), catalytic domain | Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only arginyl tRNA synthetase. | Domain | |
| PF05746 | DALR anticodon binding domain (DALR_1) | DALR anticodon binding domain | This all alpha helical domain is the anticodon binding domain in Arginyl and glycyl tRNA synthetase. This domain is known as the DALR domain after characteristic conserved amino acids [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036695 | Arginyl tRNA synthetase N-terminal domain superfamily | Homologous Superfamily | |
| IPR005148 | Arginyl tRNA synthetase N-terminal domain | Domain | |
| IPR001412 | Aminoacyl-tRNA synthetase, class I, conserved site | Conserved Site | |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding | Homologous Superfamily | |
| IPR035684 | Arginyl-tRNA synthetase, catalytic core domain | Domain | |
| IPR001278 | Arginine-tRNA ligase | Family | |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily | |
| IPR008909 | DALR anticodon binding | Domain |














