X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.52771.6M M Ammonium sulfate, 10% Dioxane, 0.1M MES pH 6.5, Deoxy-Big Chap, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
3.0159.12

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 166.028α = 90
b = 37.435β = 125.5
c = 100.559γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 210Rh coated Si vertical focus mirror2007-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCHESS BEAMLINE A10.987CHESSA1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.25099.50.10323.84.425485-1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.2898.30.4542.92480

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT2.241.592700424563244194.090.20230.19720.2496RANDOM39.4621
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.20.32-0.131.7
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.556
r_dihedral_angle_3_deg15.733
r_dihedral_angle_4_deg12.88
r_dihedral_angle_1_deg5.799
r_scangle_it2.073
r_angle_refined_deg1.416
r_scbond_it1.315
r_angle_other_deg0.99
r_mcangle_it0.705
r_mcbond_it0.641
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.556
r_dihedral_angle_3_deg15.733
r_dihedral_angle_4_deg12.88
r_dihedral_angle_1_deg5.799
r_scangle_it2.073
r_angle_refined_deg1.416
r_scbond_it1.315
r_angle_other_deg0.99
r_mcangle_it0.705
r_mcbond_it0.641
r_symmetry_vdw_other0.282
r_symmetry_vdw_refined0.199
r_symmetry_hbond_refined0.199
r_nbd_other0.192
r_nbd_refined0.179
r_nbtor_refined0.178
r_xyhbond_nbd_refined0.174
r_mcbond_other0.084
r_nbtor_other0.082
r_chiral_restr0.076
r_bond_refined_d0.011
r_bond_other_d0.009
r_gen_planes_refined0.004
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2686
Nucleic Acid Atoms186
Solvent Atoms167
Heterogen Atoms98

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection