X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.52771.6M Ammonium sulfate, 10% Dioxane, 0.1M MES pH 6.5, Deoxy-Big Chap, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
3.0259.27

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 166.238α = 90
b = 37.304β = 125.61
c = 101.31γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 210Rh coated Si vertical focus mirror2007-06-25MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCHESS BEAMLINE A10.987CHESSA1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.55099.30.11419.84.617610-1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.5999.70.4354.41714

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT2.541.171863216939169394.420.20350.19760.2592RANDOM34.1778
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.481.07-1.893.61
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.901
r_dihedral_angle_3_deg15.765
r_dihedral_angle_4_deg12.267
r_dihedral_angle_1_deg5.822
r_scangle_it1.936
r_angle_refined_deg1.361
r_scbond_it1.232
r_angle_other_deg0.944
r_mcangle_it0.656
r_mcbond_it0.559
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.901
r_dihedral_angle_3_deg15.765
r_dihedral_angle_4_deg12.267
r_dihedral_angle_1_deg5.822
r_scangle_it1.936
r_angle_refined_deg1.361
r_scbond_it1.232
r_angle_other_deg0.944
r_mcangle_it0.656
r_mcbond_it0.559
r_xyhbond_nbd_other0.403
r_symmetry_vdw_other0.278
r_symmetry_hbond_refined0.265
r_symmetry_vdw_refined0.24
r_nbd_refined0.229
r_nbd_other0.193
r_xyhbond_nbd_refined0.186
r_nbtor_refined0.184
r_mcbond_other0.085
r_nbtor_other0.083
r_chiral_restr0.069
r_bond_other_d0.013
r_bond_refined_d0.011
r_gen_planes_refined0.003
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2686
Nucleic Acid Atoms208
Solvent Atoms95
Heterogen Atoms82

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection