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Crystal Structure of MDC1 FHA Domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 4.6 291 1.32M ammonium sulfate, 0.05M sodium acetate pH 4.6, 5% v/v methyl-pentanediol, Microbatch, temperature 291K
Crystal Properties Matthews coefficient Solvent content 1.87 34.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.25 α = 90 b = 54.711 β = 90 c = 98.063 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 20 93.7 0.084 3 9055 9055 2.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.4 90.2 0.4 2.9 992
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 15.03 7988 7988 393 94.05 0.20915 0.20649 0.2059 0.26095 0.2543 RANDOM 51.343
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.2 -1.06 0.86
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.466 r_dihedral_angle_4_deg 19.079 r_dihedral_angle_3_deg 18.642 r_dihedral_angle_1_deg 6.681 r_angle_refined_deg 1.466 r_chiral_restr 0.086 r_bond_refined_d 0.009 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1688 Nucleic Acid Atoms Solvent Atoms 79 Heterogen Atoms 35
Software Software Software Name Purpose HKL-2000 data collection PHASER phasing REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling