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Crystal structure of Selenomethionine ZU5A-ZU5B protein domains of human erythrocyte ankyrin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 283.15 25% ethanol, 0.1 M Tris pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 283.15K
Crystal Properties Matthews coefficient Solvent content 2.5 50.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 279.48 α = 90 b = 40.873 β = 92.01 c = 95.249 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2009-10-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 0.97626 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 38.7 99.9 0.042 0.042 14.2 55529 55529
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.3 99.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.21 24.9 51531 51530 2720 98.69 0.22258 0.22064 0.2224 0.25878 0.2502 RANDOM 35.142
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.32 -0.3 0.28 0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.717 r_dihedral_angle_4_deg 16.897 r_dihedral_angle_3_deg 13.652 r_dihedral_angle_1_deg 6.695 r_scangle_it 2.673 r_scbond_it 1.582 r_angle_refined_deg 1.346 r_mcangle_it 0.917 r_angle_other_deg 0.845 r_mcbond_it 0.476
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.717 r_dihedral_angle_4_deg 16.897 r_dihedral_angle_3_deg 13.652 r_dihedral_angle_1_deg 6.695 r_scangle_it 2.673 r_scbond_it 1.582 r_angle_refined_deg 1.346 r_mcangle_it 0.917 r_angle_other_deg 0.845 r_mcbond_it 0.476 r_mcbond_other 0.108 r_chiral_restr 0.075 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7508 Nucleic Acid Atoms Solvent Atoms 189 Heterogen Atoms 39
Software Software Software Name Purpose MAR345dtb data collection SHARP phasing REFMAC refinement XDS data reduction SCALA data scaling