☰ Navigation Tabs
Crystal Structure Analysis of Cu Human Insulin Derivative
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1MSO
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.4 1mM sodium citrate, volume fractions of acetone 10% and 7.5 mM cooper(II) acetate monohydrate, pH 6.4, VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 1.86 33.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.56 α = 90 b = 81.56 β = 90 c = 33.747 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 5.2R 1.0 ELETTRA 5.2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.12 40.78 97.9 0.048 0.048 15.1 3.6 31826
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1mso 1.12 24.14 30207 1616 98.58 0.13478 0.13245 0.1411 0.17902 0.1838 RANDOM 11.364
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.064 r_dihedral_angle_3_deg 13.021 r_dihedral_angle_4_deg 8.499 r_scangle_it 7.16 r_dihedral_angle_1_deg 6.601 r_scbond_it 5.166 r_mcangle_it 3.769 r_mcbond_other 3.477 r_rigid_bond_restr 2.909 r_mcbond_it 2.673
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.064 r_dihedral_angle_3_deg 13.021 r_dihedral_angle_4_deg 8.499 r_scangle_it 7.16 r_dihedral_angle_1_deg 6.601 r_scbond_it 5.166 r_mcangle_it 3.769 r_mcbond_other 3.477 r_rigid_bond_restr 2.909 r_mcbond_it 2.673 r_angle_refined_deg 2.07 r_angle_other_deg 1.367 r_chiral_restr 0.129 r_bond_refined_d 0.028 r_gen_planes_refined 0.013 r_gen_planes_other 0.012 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 810 Nucleic Acid Atoms Solvent Atoms 156 Heterogen Atoms 2
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling AMoRE phasing REFMAC refinement PDB_EXTRACT data extraction