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Holo form of carbon disulfide hydrolase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.2 293 25% PEG 1000
200 mM LiCl
50 mM phosphate/citrate buffer , pH 4.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.68 54.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 204.95 α = 90 b = 113.24 β = 90 c = 87.14 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 PIXEL PSI PILATUS 6M LN2 cooled fixed-exit
Si(111) monochromator, Dynamically bendable mirror 2008-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.97178 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 40 99.5 0.131 63162
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.7 99.2 0.463
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.6 40 59897 59897 3323 99.5 0.2675 0.2675 0.26573 0.29922 0.295 RANDOM 32.627
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.63 3.14 -0.51
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.067 r_dihedral_angle_4_deg 17.256 r_dihedral_angle_3_deg 16.975 r_dihedral_angle_1_deg 6.161 r_angle_refined_deg 1.11 r_scangle_it 0.981 r_angle_other_deg 0.77 r_scbond_it 0.624 r_mcangle_it 0.416 r_mcbond_it 0.375
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.067 r_dihedral_angle_4_deg 17.256 r_dihedral_angle_3_deg 16.975 r_dihedral_angle_1_deg 6.161 r_angle_refined_deg 1.11 r_scangle_it 0.981 r_angle_other_deg 0.77 r_scbond_it 0.624 r_mcangle_it 0.416 r_mcbond_it 0.375 r_symmetry_vdw_other 0.276 r_symmetry_vdw_refined 0.258 r_nbd_refined 0.194 r_symmetry_hbond_refined 0.19 r_nbd_other 0.177 r_nbtor_refined 0.176 r_xyhbond_nbd_refined 0.173 r_xyhbond_nbd_other 0.149 r_nbtor_other 0.082 r_chiral_restr 0.065 r_metal_ion_refined 0.056 r_mcbond_other 0.046 r_bond_refined_d 0.008 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13096 Nucleic Acid Atoms Solvent Atoms 191 Heterogen Atoms 8
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling REFMAC phasing