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Crystal structure of NS3/4A protease in complex with Telaprevir
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop, vapor diffusion 6.2 295 20-25% PEG 3350, 0.1M MES (pH 6.5), 4% ammonium sulfate, hanging drop, vapor diffusion, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.28 45.94
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.116 α = 90 b = 58.85 β = 90 c = 60.331 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 2001-03-31 SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-F 0.97872 APS 21-ID-F
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 50 99.9 0.05 13.8 5.6 39340
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.45 100 0.476 5.5 3852
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.4 33.47 39154 1959 99.34 0.1584 0.1578 0.1588 0.1711 0.1711 RANDOM 19.491
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.87 -0.76 -0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.26 r_dihedral_angle_4_deg 11.783 r_dihedral_angle_3_deg 11.51 r_dihedral_angle_1_deg 6.069 r_scangle_it 2.864 r_scbond_it 1.838 r_angle_refined_deg 1.32 r_mcangle_it 1.191 r_angle_other_deg 0.835 r_mcbond_it 0.654
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.26 r_dihedral_angle_4_deg 11.783 r_dihedral_angle_3_deg 11.51 r_dihedral_angle_1_deg 6.069 r_scangle_it 2.864 r_scbond_it 1.838 r_angle_refined_deg 1.32 r_mcangle_it 1.191 r_angle_other_deg 0.835 r_mcbond_it 0.654 r_mcbond_other 0.173 r_chiral_restr 0.079 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1429 Nucleic Acid Atoms Solvent Atoms 167 Heterogen Atoms 61
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction