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Crystal structure of SAMP1 from Haloferax volcanii
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 41.881 α = 90 b = 42.251 β = 90 c = 43.568 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH 2 2 x-ray 100 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 6C1 1.23985 PAL/PLS 6C1 2 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NE3A 0.97951, 0.97973, 0.98361 Photon Factory AR-NE3A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.55 50 0.064 12.8 11712 11712
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD 1.55 30.193 11712 11459 1124 97.98 0.2037 0.2037 0.1995 0.1945 0.2434 0.2347 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.0304 3.6894 -6.7198
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 10.716 f_angle_d 0.964 f_chiral_restr 0.061 f_bond_d 0.006 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 639 Nucleic Acid Atoms Solvent Atoms 89 Heterogen Atoms 8
Software Software Software Name Purpose HKL-2000 data collection SOLVE phasing PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling