Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
3BDC with all H20s, Ca2+ and THP removed and the following truncations: H8A, T13A, L25A, Q30A, K64A, Q80A, T82A, M98A, Y113A, V114A, Y115A, K116A, Q131A, K134A and K136A; all b-factors were reset to 20 A2.
Crystallization
Crystalization Experiments
ID
Method
pH
Temperature
Details
1
VAPOR DIFFUSION, HANGING DROP
7
277
25% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, vapor diffusion, hanging drop, temperature 277K
Crystal Properties
Matthews coefficient
Solvent content
2.21
44.26
Crystal Data
Unit Cell
Length ( Å )
Angle ( ˚ )
a = 31.143
α = 90
b = 60.252
β = 94.94
c = 38.013
γ = 90
Symmetry
Space Group
P 1 21 1
Diffraction
Diffraction Experiment
ID #
Crystal ID
Scattering Type
Data Collection Temperature
Detector
Detector Type
Details
Collection Date
Monochromator
Protocol
1
1
x-ray
100
CCD
ADSC QUANTUM 315
2010-01-25
M
SINGLE WAVELENGTH
Radiation Source
ID #
Source
Type
Wavelength List
Synchrotron Site
Beamline
1
SYNCHROTRON
NSLS BEAMLINE X25
1.0000
NSLS
X25
Data Collection
Overall
ID #
Resolution (High)
Resolution (Low)
Percent Possible (Observed)
R Merge I (Observed)
Net I Over Average Sigma (I)
Redundancy
Number Reflections (All)
Number Reflections (Observed)
Observed Criterion Sigma (F)
Observed Criterion Sigma (I)
B (Isotropic) From Wilson Plot
1
1.35
60
88.7
0.05
15.8
6.6
27209
27209
Highest Resolution Shell
ID #
Resolution (High)
Resolution (Low)
Percent Possible (All)
Percent Possible (Observed)
R Merge I (Observed)
Mean I Over Sigma (Observed)
Redundancy
Number Unique Reflections (All)
1
1.35
1.37
36.4
0.583
3.2
Refinement
Statistics
Diffraction ID
Structure Solution Method
Cross Validation method
Starting model
Resolution (High)
Resolution (Low)
Number Reflections (All)
Number Reflections (Observed)
Number Reflections (R-Free)
Percent Reflections (Observed)
R-Factor (Observed)
R-Work (Depositor)
R-Work (DCC)
R-Free (Depositor)
R-Free (DCC)
R-Free Selection Details
Mean Isotropic B
X-RAY DIFFRACTION
MOLECULAR REPLACEMENT
THROUGHOUT
3BDC with all H20s, Ca2+ and THP removed and the following truncations: H8A, T13A, L25A, Q30A, K64A, Q80A, T82A, M98A, Y113A, V114A, Y115A,
K116A, Q131A, K134A and K136A; all b-factors were reset to 20 A2.