X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.5298200 mM ammonium acetate, 100 mM Bis-Tris, pH 6.5, and 25% (w/v) polyethylene glycol 3350, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.1342.21

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 48.807α = 90
b = 42.76β = 112.35
c = 61.203γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2008-11-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL12-21.0SSRLBL12-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
10.9556.791.90.1219.713535622

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (I)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONAB INITIO PHASINGTHROUGHOUT0.9556.62135356673291.90.13460.133430.15691RANDOM9.434
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.020.02-0.080.08
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.837
r_dihedral_angle_4_deg18.624
r_dihedral_angle_3_deg13.591
r_sphericity_free12.295
r_dihedral_angle_1_deg7.332
r_sphericity_bonded6.829
r_scangle_it4.979
r_scbond_it3.588
r_angle_other_deg3.5
r_mcangle_it2.496
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.837
r_dihedral_angle_4_deg18.624
r_dihedral_angle_3_deg13.591
r_sphericity_free12.295
r_dihedral_angle_1_deg7.332
r_sphericity_bonded6.829
r_scangle_it4.979
r_scbond_it3.588
r_angle_other_deg3.5
r_mcangle_it2.496
r_angle_refined_deg2.431
r_rigid_bond_restr1.861
r_mcbond_it1.706
r_mcbond_other1.045
r_chiral_restr0.147
r_bond_refined_d0.026
r_gen_planes_refined0.013
r_gen_planes_other0.005
r_bond_other_d0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1892
Nucleic Acid Atoms
Solvent Atoms414
Heterogen Atoms7

Software

Software
Software NamePurpose
iMOSFLMdata reduction
REFMACrefinement
ACORNphasing