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ABL kinase in complex with imatinib and a fragment (FRAG1) in the myristate pocket
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 277 protein concentration: 20mg/ml. Crystallisation buffer: 0.1M MES pH 6.5, 0.2M MgCl2, 18.4% PEG4000, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.41 49.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 115.783 α = 90 b = 147.346 β = 90 c = 152.833 γ = 90
Symmetry Space Group F 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2006-08-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 1.0000 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 33.92 97.6 0.065 11.38 4 58848 58848
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.88 83.3 0.365 2.58 2.6 6016
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.8 33.92 55882 2942 98.26 0.18794 0.18552 0.1835 0.23391 0.2319 RANDOM 31.212
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.92 -0.84 -1.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.912 r_dihedral_angle_4_deg 16.498 r_dihedral_angle_3_deg 15.357 r_dihedral_angle_1_deg 6.594 r_scangle_it 5.363 r_scbond_it 3.435 r_mcangle_it 2.41 r_angle_refined_deg 1.986 r_mcbond_it 1.436 r_chiral_restr 0.161
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.912 r_dihedral_angle_4_deg 16.498 r_dihedral_angle_3_deg 15.357 r_dihedral_angle_1_deg 6.594 r_scangle_it 5.363 r_scbond_it 3.435 r_mcangle_it 2.41 r_angle_refined_deg 1.986 r_mcbond_it 1.436 r_chiral_restr 0.161 r_bond_refined_d 0.026 r_gen_planes_refined 0.011
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4359 Nucleic Acid Atoms Solvent Atoms 443 Heterogen Atoms 104
Software Software Software Name Purpose MAR345dtb data collection REFMAC refinement XDS data reduction XSCALE data scaling REFMAC phasing