X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.229312.5 % (v/v) ethylene glycol, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.2846.16

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 59.006α = 90
b = 62.157β = 90
c = 97.899γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 225 mm CCDMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBESSY BEAMLINE 14.20.91841BESSY14.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.0538.4697.70.0570.05715.95.223107225761133.7
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.052.0997.40.6640.6642.34.91094

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT3C0I2.1302053620070108397.730.221260.221260.218630.26849RANDOM46.325
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.6-3.833.23
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.873
r_dihedral_angle_4_deg17.812
r_dihedral_angle_3_deg16.897
r_dihedral_angle_1_deg5.262
r_scangle_it1.719
r_angle_refined_deg1.209
r_scbond_it1.099
r_mcangle_it0.741
r_mcbond_it0.437
r_nbtor_refined0.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.873
r_dihedral_angle_4_deg17.812
r_dihedral_angle_3_deg16.897
r_dihedral_angle_1_deg5.262
r_scangle_it1.719
r_angle_refined_deg1.209
r_scbond_it1.099
r_mcangle_it0.741
r_mcbond_it0.437
r_nbtor_refined0.3
r_xyhbond_nbd_refined0.2
r_nbd_refined0.197
r_symmetry_vdw_refined0.141
r_symmetry_hbond_refined0.128
r_chiral_restr0.078
r_bond_refined_d0.011
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2422
Nucleic Acid Atoms
Solvent Atoms194
Heterogen Atoms31

Software

Software
Software NamePurpose
MAR345dtbdata collection
MOLREPphasing
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling