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Pyranose 2-oxidase T169A, monoclinic
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.2 298 0.1M MES, 50MM MgCl2, 10% (W/V)% monomethylether PEG 2000, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.56 51.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 100.403 α = 90 b = 102.731 β = 91.02 c = 137.817 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm MIRRORS 2009-06-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I911-2 MAX II I911-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 28.5 98.8 0.094 12.7 3.6 217370
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 2 98.4 0.566 2.7 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.9 28.5 214152 3217 98.8 0.195 0.195 0.246 0.2298 RANDOM 14.3
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.05 -0.29 -0.47 1.52
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.348 r_dihedral_angle_4_deg 17.101 r_dihedral_angle_3_deg 14.689 r_dihedral_angle_1_deg 7.206 r_scangle_it 4.451 r_scbond_it 2.871 r_angle_refined_deg 1.968 r_mcangle_it 1.844 r_mcbond_it 1.099 r_angle_other_deg 0.815
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.348 r_dihedral_angle_4_deg 17.101 r_dihedral_angle_3_deg 14.689 r_dihedral_angle_1_deg 7.206 r_scangle_it 4.451 r_scbond_it 2.871 r_angle_refined_deg 1.968 r_mcangle_it 1.844 r_mcbond_it 1.099 r_angle_other_deg 0.815 r_mcbond_other 0.347 r_chiral_restr 0.156 r_bond_refined_d 0.022 r_gen_planes_refined 0.01 r_bond_other_d r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 18135 Nucleic Acid Atoms Solvent Atoms 1818 Heterogen Atoms 224
Software Software Software Name Purpose MAR345 data collection FFT model building CCP4 model building REFMAC refinement XDS data reduction XSCALE data scaling FFT phasing CCP4 phasing