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Glucose-6-phosphate isomerase from Francisella tularensis.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 289 0.2 M Ca(OAc)2, 0.1 M MES buffer, 10% 2-propanol, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.61 52.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 115.064 α = 90 b = 115.064 β = 90 c = 84.455 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r 2009-10-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM 0.9792 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.48 32.2 99.1 0.093 12.7 9.8 106870 106870 25.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.48 1.51 92 0.679 2.08 5.3 4930
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.48 32.3 106466 106466 5315 98.64 0.126 0.126 0.124 0.1574 0.158 0.1824 RANDOM 16.275
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.43 -0.22 -0.43 0.65
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.75 r_dihedral_angle_4_deg 14.8 r_dihedral_angle_3_deg 12.914 r_scangle_it 5.734 r_dihedral_angle_1_deg 5.654 r_scbond_it 3.933 r_mcangle_it 2.39 r_angle_refined_deg 1.629 r_mcbond_it 1.595 r_rigid_bond_restr 1.536
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.75 r_dihedral_angle_4_deg 14.8 r_dihedral_angle_3_deg 12.914 r_scangle_it 5.734 r_dihedral_angle_1_deg 5.654 r_scbond_it 3.933 r_mcangle_it 2.39 r_angle_refined_deg 1.629 r_mcbond_it 1.595 r_rigid_bond_restr 1.536 r_angle_other_deg 1.015 r_mcbond_other 0.542 r_chiral_restr 0.108 r_bond_refined_d 0.019 r_gen_planes_refined 0.009 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4730 Nucleic Acid Atoms Solvent Atoms 724 Heterogen Atoms 23
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction SBC-Collect data collection HKL-3000 data reduction HKL-3000 data scaling SHELXD phasing MLPHARE phasing DM phasing SOLVE phasing RESOLVE phasing HKL-3000 phasing