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Open Conformation of HtsA Complexed with Staphyloferrin A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 7 298 0.1 M Hepes, 24% Jeffamine ED-2001, pH 7.0, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.15 42.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.564 α = 90 b = 43.515 β = 100.56 c = 75.324 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2009-02-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 1.0 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.3 50 99.2 0.056 12 3.5 69549
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.3 1.35 97.7 0.355 3.1 3.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.3 29.9 65945 3504 99.25 0.15528 0.15366 0.1517 0.18571 0.1834 RANDOM 16.534
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.34 -0.84 0.13 -0.78
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.841 r_dihedral_angle_4_deg 16.996 r_dihedral_angle_3_deg 11.778 r_dihedral_angle_1_deg 5.754 r_scangle_it 5.754 r_scbond_it 3.787 r_mcangle_it 2.574 r_rigid_bond_restr 1.719 r_mcbond_it 1.646 r_angle_refined_deg 1.494
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.841 r_dihedral_angle_4_deg 16.996 r_dihedral_angle_3_deg 11.778 r_dihedral_angle_1_deg 5.754 r_scangle_it 5.754 r_scbond_it 3.787 r_mcangle_it 2.574 r_rigid_bond_restr 1.719 r_mcbond_it 1.646 r_angle_refined_deg 1.494 r_chiral_restr 0.095 r_bond_refined_d 0.013 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2307 Nucleic Acid Atoms Solvent Atoms 313 Heterogen Atoms 52
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction Blu-Ice data collection