3LCY | pdb_00003lcy

Titin Ig tandem domains A164-A165

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	7.5	293	0.1M Hepes PH 7.5, 10% iso-propanol 8.5% PEG20,000, VAPOR DIFFUSION, HANGING DROP, temperature 293K

Crystal Properties
Matthews coefficient	Solvent content
2.62	53.05

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 77.086	α = 90
b = 103.821	β = 90
c = 116.533	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MAR CCD 165 mm		2007-02-12	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	EMBL/DESY, HAMBURG BEAMLINE X13	0.8088	EMBL/DESY, HAMBURG	X13

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.5	43.06	99.4	0.111	6.5	11.7	32998	32969

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.5	2.63	96		0.536	1.4	10.8

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	2.5	36.59	48357	31271	1666	99.37	0.2035	0.2035	0.2	0.2398	0.23	RANDOM	3.505

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.94			0.27		-1.22

RMS Deviations
Key	Refinement Restraint Deviation
f_dihedral_angle_2_deg	33.864
f_dihedral_angle_3_deg	19.533
f_dihedral_angle_4_deg	18.829
f_dihedral_angle_1_deg	7.144
f_scangle_it	2.197
f_angle_refined_deg	1.636
f_scbond_it	1.324
f_mcangle_it	0.62
f_mcbond_it	0.342
f_chiral_restr	0.104
f_bond_refined_d	0.018
f_gen_planes_refined	0.006
f_bond_other_d
f_angle_other_deg
f_gen_planes_other
f_nbd_refined
f_nbd_other
f_nbtor_refined
f_nbtor_other
f_xyhbond_nbd_refined
f_xyhbond_nbd_other
f_metal_ion_refined
f_metal_ion_other
f_symmetry_vdw_refined
f_symmetry_vdw_other
f_symmetry_hbond_refined
f_symmetry_hbond_other
f_symmetry_metal_ion_refined
f_symmetry_metal_ion_other
f_mcbond_other
f_rigid_bond_restr
f_sphericity_free
f_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6210
Nucleic Acid Atoms
Solvent Atoms	332
Heterogen Atoms

Software

Software
Software Name	Purpose
PHENIX	refinement
SOLVE	phasing
REFMAC	refinement
XDS	data reduction
SCALA	data scaling
DNA	data collection