X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1microbatch under oil4.629530% MPD, 100 mM sodium acetate pH 4.6, 20 mM calcium chloride, microbatch under oil, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
2.244.1

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 83.481α = 90
b = 166.141β = 105.14
c = 101.289γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152008-10-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.20.9194ALS8.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.8100100655896558911
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.82.91000.3835.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.842.1356558961921330399.130.226430.224270.26627RANDOM53.214
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.610.04-0.424.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.895
r_dihedral_angle_3_deg15.139
r_dihedral_angle_4_deg12.64
r_dihedral_angle_1_deg4.373
r_angle_refined_deg0.998
r_scangle_it0.556
r_mcangle_it0.371
r_scbond_it0.305
r_nbtor_refined0.287
r_mcbond_it0.207
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.895
r_dihedral_angle_3_deg15.139
r_dihedral_angle_4_deg12.64
r_dihedral_angle_1_deg4.373
r_angle_refined_deg0.998
r_scangle_it0.556
r_mcangle_it0.371
r_scbond_it0.305
r_nbtor_refined0.287
r_mcbond_it0.207
r_nbd_refined0.161
r_xyhbond_nbd_refined0.105
r_symmetry_vdw_refined0.096
r_chiral_restr0.057
r_symmetry_hbond_refined0.034
r_bond_refined_d0.006
r_gen_planes_refined0.002
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms18009
Nucleic Acid Atoms
Solvent Atoms208
Heterogen Atoms263

Software

Software
Software NamePurpose
ADSCdata collection
MOLREPphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling