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Crystal structure of abscisic acid-bound PYL2 in complex with HAB1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 298 PEG 3350, pH 6.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.64 53.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.319 α = 90 b = 67.466 β = 90 c = 143.905 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2009-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.0 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 30 86.7 0.093 12.2 45661 41123 2 2
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.95 29.52 41123 2918 94.3 0.217 0.214 0.2179 0.259 0.2628 49.51
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.33 4.94 -2.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.278 r_dihedral_angle_4_deg 22.19 r_sphericity_free 17.732 r_dihedral_angle_3_deg 16.916 r_sphericity_bonded 9.98 r_dihedral_angle_1_deg 6.883 r_scangle_it 6.505 r_scbond_it 4.358 r_mcangle_it 3.734 r_rigid_bond_restr 2.443
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.278 r_dihedral_angle_4_deg 22.19 r_sphericity_free 17.732 r_dihedral_angle_3_deg 16.916 r_sphericity_bonded 9.98 r_dihedral_angle_1_deg 6.883 r_scangle_it 6.505 r_scbond_it 4.358 r_mcangle_it 3.734 r_rigid_bond_restr 2.443 r_mcbond_it 2.217 r_angle_refined_deg 1.867 r_angle_other_deg 1.033 r_mcbond_other 0.696 r_chiral_restr 0.207 r_bond_refined_d 0.023 r_gen_planes_refined 0.009 r_gen_planes_other 0.003 r_bond_other_d 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3681 Nucleic Acid Atoms Solvent Atoms 230 Heterogen Atoms 22
Software Software Software Name Purpose PHASER phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction