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Crystal structure of abscisic acid receptor PYL1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 298 PEG 4000, pH 7.5, vapor diffusion, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.47 64.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 126.764 α = 90 b = 126.764 β = 90 c = 61.407 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2009-08-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.0 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 30 72 0.079 22.5 28736 22196 2 2
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 2.4 29.57 22196 1608 99.9 0.219 0.217 0.2171 0.248 0.2443 72.59
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.47 -2.23 -4.47 6.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.474 r_dihedral_angle_4_deg 18.73 r_dihedral_angle_3_deg 17.982 r_sphericity_free 12.508 r_sphericity_bonded 7.157 r_dihedral_angle_1_deg 5.943 r_scangle_it 4.53 r_mcangle_it 3.523 r_scbond_it 2.737 r_rigid_bond_restr 2.623
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.474 r_dihedral_angle_4_deg 18.73 r_dihedral_angle_3_deg 17.982 r_sphericity_free 12.508 r_sphericity_bonded 7.157 r_dihedral_angle_1_deg 5.943 r_scangle_it 4.53 r_mcangle_it 3.523 r_scbond_it 2.737 r_rigid_bond_restr 2.623 r_mcbond_it 1.927 r_angle_refined_deg 1.387 r_angle_other_deg 0.889 r_mcbond_other 0.298 r_chiral_restr 0.083 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2796 Nucleic Acid Atoms Solvent Atoms 126 Heterogen Atoms
Software Software Software Name Purpose PHASER phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction