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The Abscisic acid receptor PYR1 in complex with Abscisic Acid
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3CNW
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 0.2 M sodium magnesium acetate, 0.1M sodium cacodylate pH 6.5, 18% PEG 8000, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.4 48.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.81 α = 105.65 b = 61.28 β = 102.23 c = 72.55 γ = 89.91
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r mirrors 2009-05-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 0.933 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 25 93.3 54557 50927
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 86.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3CNW 2 24.67 54577 50927 2647 100 0.20209 0.20042 0.2256 0.23394 0.2568 RANDOM 26.418
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.88 0.1 0.88 -2.27 0.26 0.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.62 r_dihedral_angle_4_deg 18.445 r_dihedral_angle_3_deg 17.333 r_dihedral_angle_1_deg 7.505 r_scangle_it 2.987 r_scbond_it 1.816 r_angle_refined_deg 1.478 r_mcangle_it 1.333 r_mcbond_it 0.712 r_chiral_restr 0.107
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.62 r_dihedral_angle_4_deg 18.445 r_dihedral_angle_3_deg 17.333 r_dihedral_angle_1_deg 7.505 r_scangle_it 2.987 r_scbond_it 1.816 r_angle_refined_deg 1.478 r_mcangle_it 1.333 r_mcbond_it 0.712 r_chiral_restr 0.107 r_bond_refined_d 0.01 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5584 Nucleic Acid Atoms Solvent Atoms 550 Heterogen Atoms 60
Software Software Software Name Purpose XDS data scaling PHASER phasing REFMAC refinement XDS data reduction