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M. acetivorans Molybdate-Binding Protein (ModA) in Citrate-Bound Open Form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 293 4mM Sodium Sulfate, 1.4M Ammonium Citrate, pH6.0, vapor diffusion, sitting drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.57 52.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.629 α = 90 b = 81.629 β = 90 c = 104.636 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2005-09-30 SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 0.980 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.69 58.62 96.9 0.054 0.04 16.3 5.8 84835
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.69 1.75 82.3 0.593 0.472 2.26 3.8 7182
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.69 58.62 43968 2184 99.51 0.19 0.189 0.2001 0.211 0.2243 RANDOM 19.883
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.93 0.47 0.93 -1.4
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.452 r_dihedral_angle_4_deg 15.793 r_dihedral_angle_3_deg 11.153 r_dihedral_angle_1_deg 5.364 r_scangle_it 1.737 r_scbond_it 0.997 r_angle_refined_deg 0.975 r_mcangle_it 0.676 r_mcbond_it 0.346 r_chiral_restr 0.072
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.452 r_dihedral_angle_4_deg 15.793 r_dihedral_angle_3_deg 11.153 r_dihedral_angle_1_deg 5.364 r_scangle_it 1.737 r_scbond_it 0.997 r_angle_refined_deg 0.975 r_mcangle_it 0.676 r_mcbond_it 0.346 r_chiral_restr 0.072 r_bond_refined_d 0.006 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2423 Nucleic Acid Atoms Solvent Atoms 294 Heterogen Atoms 13
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling EPMR phasing REFMAC refinement PDB_EXTRACT data extraction CrystalClear data collection